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EDP08427 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08427" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08427Predicted protein (91 aa)    
Predicted Functional Partners:
EDP01097
Predicted protein (181 aa)
     
 
  0.954
EDP00988
AIR synthase-related protein (1403 aa)
   
      0.922
NOP58
Nucleolar protein, component of C/D snoRNPs (508 aa)
     
  0.915
EDP06385
Predicted protein (602 aa)
   
  0.873
EDP07231
Predicted protein (440 aa)
   
  0.868
EDP07550
Predicted protein (281 aa)
     
 
  0.859
EDO99010
Predicted protein (80 aa)
   
  0.842
SPL8
U2 snRNP auxiliary factor, large subunit (306 aa)
   
  0.841
EDP08560
Predicted protein (223 aa)
     
  0.841
NOP56
Nucleolar protein, component of C/D snoRNPs (498 aa)
     
  0.830
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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