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EDP08434 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08434" - poly(A) binding protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08434poly(A) binding protein (136 aa)    
Predicted Functional Partners:
SSA7
Predicted protein (765 aa)
     
  0.982
EDP09275
Predicted protein (73 aa)
     
  0.981
EIF4G
Eukaryotic initiation factor (797 aa)
     
  0.952
RB47
Polyadenylate-binding protein RB47; Binds the poly(A) tail of mRNA (636 aa)
     
  0.944
PAP1
Poly(a) polymerase (407 aa)
     
  0.922
EDP04765
Predicted protein (266 aa)
     
  0.887
EDP05271
RNA processing protein (511 aa)
     
  0.863
EIF4E
Eukaryotic initiation factor (202 aa)
     
 
  0.837
SRP35
SR protein factor (338 aa)
     
  0.820
UPF2
UPF2 protein (301 aa)
     
  0.816
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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