STRINGSTRING
CDC48 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CDC48" - Flagellar associated protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC48Flagellar associated protein (817 aa)    
Predicted Functional Partners:
EDO99092
Predicted protein (236 aa)
     
  0.980
CPLD53
Predicted protein (102 aa)
     
  0.972
EDP00598
Predicted protein; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (257 aa)
     
  0.956
EDO97961
Predicted protein; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (129 aa)
     
  0.953
EDO97323
Predicted protein (434 aa)
     
 
  0.938
EDP00999
Predicted protein (370 aa)
     
  0.930
EDO97669
Predicted protein (336 aa)
     
  0.923
EDP08431
Predicted protein (207 aa)
     
  0.921
EDP00884
Predicted protein (202 aa)
     
  0.921
EDP04369
Predicted protein (523 aa)
     
 
  0.916
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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