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PLS1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PLS1" - Phospholipid scramblase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLS1Phospholipid scramblase (609 aa)    
Predicted Functional Partners:
APG6
Autophagy protein (495 aa)
     
 
  0.819
APG4
Autophagy protein (484 aa)
     
 
  0.814
SRP68
Subunit of the signal recognition particle (699 aa)
           
  0.712
NHP2
Nucleolar protein, small subunit of H/ACA snoRNPs (162 aa)
           
  0.711
PEX19
Pex19-like protein (363 aa)
           
  0.711
SRP72
Subunit of the signal recognition particle (746 aa)
           
  0.711
PRPS16
Plastid ribosomal protein S16 (128 aa)
           
  0.631
HTV1
Histone H3 variant (105 aa)
           
  0.572
HTV2
Histone H3 variant (97 aa)
           
  0.572
HTV3
Histone H3 variant (156 aa)
           
  0.572
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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