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LCI7 protein (Chlamydomonas reinhardtii) - STRING interaction network
"LCI7" - R53.5-related protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCI7R53.5-related protein (191 aa)    
Predicted Functional Partners:
LCI6
Low CO2 inducible protein (370 aa)
           
  0.572
GPX5
Glutathione peroxidase (162 aa)
     
        0.509
FAP292
Flagellar associated protein (169 aa)
           
  0.477
LCI31
low-CO2-inducible protein (235 aa)
           
  0.477
CLR18
Predicted protein of CLR family (702 aa)
           
  0.477
LCIE
LCIB-like gene (441 aa)
           
  0.476
ELI4
Early light-inducible protein (280 aa)
           
  0.476
LCID
Limiting CO2 inducible protein (478 aa)
           
  0.475
LCI21
low-CO2-inducible protein (559 aa)
           
  0.473
HLA3
ABC transporter (1082 aa)
           
  0.470
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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