STRINGSTRING
ERG25 protein (Chlamydomonas reinhardtii) - STRING interaction network
"ERG25" - Sterol desaturase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERG25Sterol desaturase (307 aa)    
Predicted Functional Partners:
EPT1
CDP-Ethanolamine-DAG ethanolamine phosphotransferase (383 aa)
       
 
  0.579
RAD9
DNA damage checkpoint protein (358 aa)
           
  0.537
CAS1
Cycloartenol synthase (762 aa)
     
 
  0.514
PAO3
Pheophorbide A oxygenase (365 aa)
   
   
  0.509
PAO1
Pheophorbide a oxygenase (526 aa)
   
   
  0.509
PAO2
Pheophorbide a oxygenase (542 aa)
   
   
  0.508
ATM1
DNA damage signaling kinase, ATM/TEL1-related (950 aa)
           
  0.499
PCN1
PCNA proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
     
      0.479
RAD51
DNA recombination protein (343 aa)
           
  0.472
DXS1
1-deoxy-D-xylulose 5-phosphate synthase (708 aa)
           
  0.472
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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