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CEM1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CEM1" - Chloroplast proton extrusion protein cemA in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM1Chloroplast proton extrusion protein cemA (334 aa)    
Predicted Functional Partners:
TEF8
Predicted protein (263 aa)
 
          0.535
EDP03288
Ferredoxin thioredoxin reductase, catalytic chain (145 aa)
   
          0.522
TEF9
Predicted protein (258 aa)
   
          0.502
THF1
Inositol phosphatase-like protein (266 aa)
   
          0.495
CPLD47
Predicted membrane protein (147 aa)
   
        0.494
EDO98609
Predicted protein (418 aa)
   
          0.492
APE1
Predicted protein (276 aa)
   
          0.467
CPL9
Predicted protein (250 aa)
   
          0.455
CYC6
Cytochrome c6 (148 aa)
   
          0.441
PSAL
Photosystem I reaction center subunit XI (196 aa)
   
          0.439
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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