STRINGSTRING
EDP08600 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08600" - Serine/threonine phosphatase, family 2C in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08600Serine/threonine phosphatase, family 2C (373 aa)    
Predicted Functional Partners:
EDO98475
Predicted protein (1008 aa)
   
  0.796
SAC3
Snf1-like protein kinase (357 aa)
   
  0.765
EDP01185
Predicted protein (464 aa)
   
  0.763
EDO96817
Predicted protein (311 aa)
   
  0.759
EDP04565
Predicted protein (447 aa)
   
  0.738
EDP02539
Predicted protein (1131 aa)
   
  0.737
EDO98855
Predicted protein (593 aa)
   
  0.736
EDP07370
Predicted protein (1566 aa)
   
  0.735
EDP08690
Predicted protein (158 aa)
   
  0.735
EDO99264
Predicted protein (123 aa)
   
  0.735
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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