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EDP08648 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08648" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08648Predicted protein (386 aa)    
Predicted Functional Partners:
EDO99256
Predicted protein (240 aa)
     
      0.705
SPLH1
DEAH-box nuclear pre-mRNA splicing factor (689 aa)
     
      0.696
SPLH3
DEAH-box nuclear pre-mRNA splicing factor (661 aa)
     
      0.696
EDO96359
Predicted protein (92 aa)
     
      0.696
TPR4
Predicted chloroplast-targeted protein (929 aa)
     
      0.675
EDP06657
Predicted protein (629 aa)
     
   
  0.663
EDO97905
Predicted protein (634 aa)
     
 
0.627
EDP03833
Predicted protein (612 aa)
     
 
  0.613
EDO98393
Predicted protein (418 aa)
     
 
  0.594
NGB1
Nucleolar GTP-binding protein; Involved in the biogenesis of the 60S ribosomal subunit (691 aa)
     
        0.521
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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