STRINGSTRING
EDP08648 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08648" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08648Predicted protein (386 aa)    
Predicted Functional Partners:
EDP06657
Ubiquitinyl hydrolase 1; Ubiquitin carboxyl-terminal hydrolase (629 aa)
     
   
  0.784
PRPL18
Plastid ribosomal protein L18 (145 aa)
     
   
  0.658
UBCH1p
UBCH1p; Ubiquitin carboxyl-terminal hydrolase (331 aa)
           
  0.642
EDP04564
Predicted protein; Belongs to the DEAD box helicase family (488 aa)
     
        0.582
EDP07848
Predicted protein (279 aa)
     
   
  0.580
NGB1
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (691 aa)
     
   
  0.546
NGB2
Nucleolar GTP-binding protein (189 aa)
     
   
  0.546
TPR4
Predicted chloroplast-targeted protein (929 aa)
     
      0.536
OTA1
Ornithine transaminase ; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (446 aa)
           
  0.450
EDO96108
Predicted protein (305 aa)
     
        0.405
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
Server load: low (7%) [HD]