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EDP08686 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08686" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08686Predicted protein (145 aa)    
Predicted Functional Partners:
PYR5
Uridine 5’-monophosphate synthase (474 aa)
   
   
  0.770
EDP06649
Predicted protein (353 aa)
   
 
  0.745
EIF5Ba
Eukaryotic initiation factor (1651 aa)
   
   
  0.708
TRM2B
tRNA (uracil-5)-methyltransferase (206 aa)
   
   
  0.669
EDP06926
Predicted protein (796 aa)
   
   
  0.662
FAP42
Flagellar associated protein, adenylate/guanylate kinase-like protein (2457 aa)
   
   
  0.600
NOL1
NO synthase-like protein (733 aa)
   
        0.596
EDP04943
Ribosomal RNA adenine methylase transferase (203 aa)
   
   
  0.588
EDO99928
Predicted protein (555 aa)
     
   
  0.577
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
   
 
  0.549
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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