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EDP08688 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08688" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08688Predicted protein (230 aa)    
Predicted Functional Partners:
EDP07834
Predicted protein (1059 aa)
     
        0.674
EDP07113
Predicted protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (720 aa)
     
        0.668
EDP00253
Predicted protein (417 aa)
     
        0.662
EDP09830
Predicted protein (461 aa)
     
        0.661
EDP06674
Predicted protein (216 aa)
     
        0.658
EDP06385
Predicted protein (602 aa)
     
        0.655
TRM4
tRNA-(m5C) methyltransferase (392 aa)
     
        0.654
EDP06473
Predicted protein (378 aa)
     
        0.653
EDP05784
Predicted protein (610 aa)
     
        0.650
EDP03935
Predicted protein (304 aa)
     
        0.649
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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