STRINGSTRING
EDP08691 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08691" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08691Predicted protein (233 aa)    
Predicted Functional Partners:
SMP4
Small nuclear ribonucleoprotein Sm D2 (110 aa)
     
  0.992
SPL3
SF3A3 splicing factor 3a, subunit 3 (508 aa)
     
  0.991
SMP12
U1 small nuclear ribonucleoprotein (394 aa)
     
  0.991
SMP3
Small nuclear ribonucleoprotein E (87 aa)
     
  0.990
SMP2
Small nuclear ribonucleoprotein polypeptide G (77 aa)
     
  0.989
SMPF
Small nuclear riboprotein F; Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome (85 aa)
     
  0.988
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
     
  0.987
SMP9
Small nuclear ribonucleoprotein Sm D1 (114 aa)
     
  0.987
EDP01213
Predicted protein (249 aa)
     
  0.985
FAP111
Flagellar associated protein (263 aa)
     
  0.985
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (10%) [HD]