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PAP2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PAP2" - Poly(a) polymerase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAP2Poly(a) polymerase (517 aa)    
Predicted Functional Partners:
TRF4
Trf4 poly(A) polymerase (1144 aa)
     
 
0.829
EDP01828
Hypothetical protein (397 aa)
     
 
 
0.810
EDP01779
Predicted protein (1143 aa)
     
 
  0.797
MTR4
DEAD-box family ATP dependent helicase (945 aa)
     
 
  0.792
EDP01505
Predicted protein (299 aa)
     
 
  0.768
PAP1
Poly(a) polymerase (407 aa)
     
 
  0.716
RNB2
3’-5’ exoribonuclease II (699 aa)
     
 
  0.656
RNB1
3’-5’ exoribonuclease (1061 aa)
     
 
  0.655
POLE1
DNA polymerase epsilon catalytic subunit A/1 (2367 aa)
     
 
  0.529
CPLD46
DEAD/DEAH-box helicase (485 aa)
     
 
  0.525
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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