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EDP08782 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08782" - Histone transcription regulator HIRA in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08782Histone transcription regulator HIRA (1042 aa)    
Predicted Functional Partners:
ASF1
Anti-silencing factor (225 aa)
     
  0.989
EDP00173
chromodomain-helicase-DNA-binding protein (2000 aa)
     
  0.790
EDO99484
SNF2 superfamily protein (797 aa)
     
  0.774
EDP02557
Predicted protein (856 aa)
     
  0.751
HTV1
Histone H3 variant (105 aa)
     
 
  0.737
EDP03175
Histone methyltransferase (1708 aa)
     
 
  0.736
EDP00599
Nucleosome remodeling factor (418 aa)
     
 
  0.710
EDP03152
Predicted protein (419 aa)
     
      0.707
HTV3
Histone H3 variant (156 aa)
     
 
  0.696
EDP08975
Histone H3 (135 aa)
       
 
  0.689
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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