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ADCL1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"ADCL1" - Aminotransferase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADCL1Aminotransferase (410 aa)    
Predicted Functional Partners:
ADC1
Aminodeoxychorismate synthase (724 aa)
   
 
  0.989
AAD1
Acetohydroxyacid dehydratase (604 aa)
   
  0.849
AHD1
Bifunctional aspartate kinase/homoserine dehydrogenase (917 aa)
   
   
  0.785
GUA1
GMP synthetase (535 aa)
       
  0.784
ALSL1
Acetolactate synthase, large subunit (640 aa)
   
  0.770
AAI1
Acetohydroxy acid isomeroreductase (555 aa)
   
 
  0.741
METH1
Cobalamin-dependent methionine synthase (1242 aa)
       
  0.730
METH2
Cobalamin-dependent methionine synthase (1297 aa)
       
  0.730
EDP06312
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase (145 aa)
   
 
  0.708
EDP07328
3-Isopropylmalate dehydrogenase, splicing variant a; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (400 aa)
   
 
  0.706
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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