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DDB2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"DDB2" - UV-damaged DNA binding complex subunit 2 protein in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDB2UV-damaged DNA binding complex subunit 2 protein (187 aa)    
Predicted Functional Partners:
RPA30
Replication protein A 30 kDa subunit (292 aa)
     
  0.811
RFC1
DNA replication factor C complex subunit 1 (1182 aa)
     
    0.646
RPA70B
Replication protein A, 70 kDa DNA-binding subunit (647 aa)
       
    0.610
RPA70A
Replication protein A, 70 kDa DNA-binding subunit (451 aa)
       
    0.610
DDB1
UV-damaged DNA binding complex subunit 1 protein (1147 aa)
       
  0.461
EDP06305
Predicted protein (119 aa)
     
  0.461
RFC4
DNA replication factor C complex subunit 4 (332 aa)
     
    0.457
SET3
Histone methyltransferase (957 aa)
     
      0.452
EDP01479
Predicted protein (1973 aa)
     
      0.449
RFC2
DNA replication factor C complex subunit 2 (340 aa)
     
    0.437
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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