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EDP08834 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08834" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08834Predicted protein (579 aa)    
Predicted Functional Partners:
RCL1
RNA terminal 3’ phosphate cyclase (370 aa)
     
        0.629
EDP00627
Predicted protein (513 aa)
     
        0.605
EDP05780
Predicted protein (1086 aa)
     
        0.537
EDO99796
Predicted protein; GTPase that plays an essential role in the late steps of ribosome biogenesis (446 aa)
     
        0.526
EDO98624
Predicted protein (475 aa)
     
        0.524
EDO98320
Predicted protein (641 aa)
     
        0.516
EDP05821
Predicted protein (924 aa)
     
        0.514
UTP1
Nucleolar protein, component of the U3 processome (996 aa)
     
        0.512
EDP07550
Predicted protein (281 aa)
     
        0.512
PUF1
Puf protein (717 aa)
     
        0.503
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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