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EDP08868 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08868" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08868Predicted protein (213 aa)    
Predicted Functional Partners:
EDP03638
Predicted protein (171 aa)
     
  0.753
EDO98475
Predicted protein (1008 aa)
   
   
  0.676
SHKD1
Dehydroquinate dehydratase (554 aa)
         
  0.672
POLQ1
DNA polymerase theta (2508 aa)
   
   
  0.580
EDP06363
Phosphopantothenoylcysteine decarboxylase (361 aa)
   
 
  0.564
EDP09484
Predicted protein (208 aa)
   
 
  0.550
EDP03518
Predicted protein (673 aa)
     
 
  0.496
EDP05064
Riboflavin kinase (421 aa)
   
   
  0.472
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
     
 
  0.470
EDP03899
Predicted protein (815 aa)
   
   
  0.467
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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