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EDP08873 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08873" - PAS domain protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08873PAS domain protein (2071 aa)    
Predicted Functional Partners:
EDP08395
Predicted protein (69 aa)
     
 
  0.744
EDP01312
Predicted protein (146 aa)
     
 
  0.744
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
   
   
  0.603
GSF1
Ferredoxin-dependent glutamate synthase (1552 aa)
   
   
  0.559
CLH1
Chlorophyllase I (322 aa)
           
  0.465
EDO99289
Chlamyopsin-6 (1223 aa)
   
 
  0.464
DNJ15
DnaJ-like protein (517 aa)
           
  0.430
DNJ31
DnaJ-like protein (633 aa)
           
  0.430
DUR1
Urea carboxylase (1251 aa)
         
  0.427
CYP739A3
Cytochrome P450, CYP85 clan (549 aa)
           
  0.426
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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