STRINGSTRING
SCL27 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SCL27" - SR protein factor in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL27SR protein factor (286 aa)    
Predicted Functional Partners:
RSZ22
SR protein factor (200 aa)
     
 
  0.966
EDP09861
Predicted protein (118 aa)
   
 
0.944
SRP35
SR protein factor (338 aa)
     
 
  0.904
SRP36
SR protein factor (320 aa)
     
 
  0.897
SCL26
SR protein factor (224 aa)
       
 
0.656
EDP02454
Glycine-rich RNA-binding protein (165 aa)
   
 
  0.549
EDP06893
Predicted protein (77 aa)
   
 
 
  0.538
SRP23
Nuclear SR-like RNA binding protein (194 aa)
   
 
 
  0.441
EDP08427
Predicted protein (91 aa)
   
 
 
  0.440
EDP01159
Predicted protein (170 aa)
       
 
  0.440
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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