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EDP08876 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08876" - Phycocyanobilin ferredoxin oxidoreductase-like protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08876Phycocyanobilin ferredoxin oxidoreductase-like protein (556 aa)    
Predicted Functional Partners:
EDO96349
Predicted protein (264 aa)
   
          0.520
GUN4
Tetrapyrrole-binding protein (260 aa)
   
          0.516
EDP02164
Predicted protein (139 aa)
   
          0.514
TAB2
PsaB RNA binding protein (358 aa)
   
          0.513
CPL9
Predicted protein (250 aa)
   
          0.506
CPLD11
Predicted protein (190 aa)
   
          0.500
CGL70
Predicted protein (448 aa)
   
          0.497
EDP06655
Predicted protein (64 aa)
   
        0.490
CCB3
CPLD43 protein required for cyt b6 assembly (193 aa)
   
        0.481
EDP00205
Predicted protein (232 aa)
   
          0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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