STRINGSTRING
EDP08878 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08878" - Inositol acyltransferase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08878Inositol acyltransferase (355 aa)    
Predicted Functional Partners:
GTR14
Glycosyl transferase (378 aa)
     
 
  0.946
PIA1
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase (300 aa)
     
 
  0.935
EDO98289
Predicted protein (1334 aa)
     
        0.494
APC6
Anaphase promoting complex subunit 6 (127 aa)
     
        0.475
EDP01592
Predicted protein (844 aa)
     
        0.475
EDO98302
Predicted protein (566 aa)
     
        0.475
EDP06780
Predicted protein (882 aa)
     
 
  0.465
EDP02477
RAN binding protein, RANBP1 (133 aa)
       
      0.441
EDO99505
Predicted protein (1212 aa)
     
      0.439
EDP05380
Predicted protein (203 aa)
     
        0.433
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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