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EDP08879 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08879" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08879Predicted protein (501 aa)    
Predicted Functional Partners:
EDP01276
Predicted protein (558 aa)
 
 
  0.802
EDP00013
Predicted protein (566 aa)
 
 
  0.786
PSY
Phytoene synthase (382 aa)
   
 
  0.745
EDP06129
Farnesyl-diphosphate farnesyltransferase (378 aa)
   
 
  0.739
EDO99516
Carotenoid isomerase (568 aa)
 
 
  0.718
EDP03291
Predicted protein (196 aa)
   
 
  0.629
EDO96439
Predicted protein (144 aa)
     
 
  0.591
EDP08684
Solanesyl diphosphate synthase (394 aa)
   
   
  0.464
EDP04909
Predicted protein (301 aa)
   
        0.457
CPLD35
Oxidoreductase-like protein (479 aa)
       
  0.443
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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