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EDP08900 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08900" - Condensin complex subunit H protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08900Condensin complex subunit H protein (557 aa)    
Predicted Functional Partners:
EDP00964
Predicted protein (1253 aa)
     
  0.998
SMC2
Structural maintenance of chromosomes protein 2 (1165 aa)
     
  0.998
SMC4
Structural maintenance of chromosomes protein 4 (1237 aa)
     
  0.998
EDP06267
Chromosome condensation complex protein (2665 aa)
     
  0.997
SMC5B
Structural maintenance of chromosomes protein 5B (1124 aa)
     
  0.959
SMC6A
Structural maintenance of chromosomes protein 6A (1207 aa)
     
  0.956
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
     
 
  0.956
EDP07530
Predicted protein (565 aa)
     
   
  0.911
SMC1
Structural maintenance of chromosomes protein 1 (818 aa)
     
  0.902
SMC3
Structural maintenance of chromosomes protein 3 (1121 aa)
     
  0.897
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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