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EDP08910 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08910" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08910Predicted protein (372 aa)    
Predicted Functional Partners:
CGL74
Predicted protein (350 aa)
     
        0.661
PRFB1
Peptide chain release factor (263 aa)
     
        0.658
SHKD1
Dehydroquinate dehydratase (554 aa)
     
        0.657
TBC2
Translation factor for chloroplast psbC mRNA (1115 aa)
     
        0.604
CGLD11
Predicted protein (300 aa)
     
        0.573
PRORS1
Organellar class II aminoacyl tRNA synthetase (580 aa)
     
        0.532
EDO98322
cysteinyl-tRNA synthetase (637 aa)
     
        0.525
DXR1
1-deoxy-D-xylulose 5-phosphate reductoisomerase (415 aa)
     
        0.519
EDP07593
Predicted protein (443 aa)
     
        0.518
GAT1
Glutamyl tRNA amidotransferase, subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln) (533 aa)
     
        0.513
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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