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UBQ7 protein (Chlamydomonas reinhardtii) - STRING interaction network
"UBQ7" - Ubiquitin-fusion protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBQ7Ubiquitin-fusion protein (338 aa)    
Predicted Functional Partners:
RPS4
Ribosomal protein S4 (261 aa)
     
  0.978
RPS3a
Ribosomal protein S3a (259 aa)
     
  0.978
RPS6
Ribosomal protein S6 (248 aa)
     
  0.976
RPS7
Ribosomal protein S7 (194 aa)
     
  0.964
RPS16
Ribosomal protein S16 (142 aa)
     
  0.960
RPS13
Ribosomal protein S13 (151 aa)
     
    0.958
RPS28
Ribosomal protein S28 (65 aa)
     
  0.958
RPS29
Ribosomal protein S29 (56 aa)
     
  0.957
RPS26
Ribosomal protein S26 (101 aa)
     
  0.957
RPSa
Ribosomal protein Sa; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits (279 aa)
     
  0.955
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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