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EDP08920 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08920" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08920Predicted protein (523 aa)    
Predicted Functional Partners:
EDP06927
Predicted protein (162 aa)
     
 
    0.812
EDP09742
Predicted protein (143 aa)
         
    0.800
EDP02992
Predicted protein (235 aa)
   
   
  0.703
EDP09704
Predicted protein (468 aa)
     
        0.697
UTP1
Nucleolar protein, component of the U3 processome (996 aa)
     
        0.692
EDP06385
Predicted protein (602 aa)
   
   
  0.690
NOP14
Nucleolar protein (1137 aa)
     
        0.688
EDP06473
Predicted protein (378 aa)
   
        0.675
RET1
Predicted protein (1029 aa)
     
   
  0.671
EDP07462
Predicted protein (940 aa)
     
        0.670
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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