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PRP18 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PRP18" - pre-mRNA splicing factor 18 in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRP18pre-mRNA splicing factor 18 (178 aa)    
Predicted Functional Partners:
EDP03137
Predicted protein (494 aa)
     
 
  0.847
EDP03700
Plastocyanin-like protein (245 aa)
           
  0.807
SPLH2
DEAH-box nuclear pre-mRNA splicing factor (371 aa)
     
 
  0.795
EDO99256
Predicted protein (240 aa)
     
 
  0.788
EDO96359
Predicted protein (92 aa)
     
 
  0.775
SPLH1
DEAH-box nuclear pre-mRNA splicing factor (689 aa)
     
 
  0.767
SPLH3
DEAH-box nuclear pre-mRNA splicing factor (661 aa)
     
 
  0.767
PNP1
Polyribonucleotide phosphorylase PNPase (599 aa)
     
 
  0.729
PRP17
Nuclear pre-mRNA splicing factor, component of the spliceosome (313 aa)
     
 
  0.676
EDP09815
Predicted protein (517 aa)
     
 
  0.658
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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