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EDP08960 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08960" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08960Predicted protein (1109 aa)    
Predicted Functional Partners:
EDP04201
Predicted protein (431 aa)
     
        0.597
EDP04971
SAM-dependent methyltransferase (322 aa)
     
        0.521
EDP03012
Predicted protein (1793 aa)
     
        0.516
EDP05547
Predicted protein (603 aa)
     
        0.480
EDP07562
Predicted protein (370 aa)
     
        0.476
STPK21
Serine/threonine protein kinase 21 (411 aa)
     
        0.475
EDP02724
Predicted protein (918 aa)
     
        0.475
EDP00236
Ser/thr protein kinase (217 aa)
     
        0.475
EDO96080
Predicted protein (1418 aa)
     
        0.426
EDO98478
Predicted protein (663 aa)
     
        0.419
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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