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SRP54 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SRP54" - Subunit of the signal recognition particle in Chlamydomonas reinhardtii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRP54Subunit of the signal recognition particle (503 aa)    
Predicted Functional Partners:
SRP68
Subunit of the signal recognition particle (699 aa)
     
  0.982
SRP14
Subunit of the signal recognition particle (98 aa)
       
  0.982
SRP19
Subunit of the signal recognition particle (143 aa)
     
  0.981
SRP9
Subunit of the signal recognition particle (110 aa)
     
  0.977
SRRA1
Alpha subunit of the SRP receptor (687 aa)
 
0.959
RPL23a
Ribosomal protein L23a (147 aa)
     
  0.956
RPL35
Ribosomal protein L35 (130 aa)
     
    0.956
FTSY
Chloroplast SRP receptor (338 aa)
 
0.949
RPL8
Ribosomal protein L8 (259 aa)
     
  0.940
RPL13a
Ribosomal protein L13a (185 aa)
   
  0.939
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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