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EDP08974 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08974" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08974Predicted protein (485 aa)    
Predicted Functional Partners:
EDP06690
Predicted protein (795 aa)
     
        0.649
EDP03081
Predicted protein (2942 aa)
     
        0.620
RNB1
3’-5’ exoribonuclease (1061 aa)
     
        0.561
EDO98865
Predicted protein (440 aa)
     
        0.525
EDP01286
Predicted protein (361 aa)
     
        0.522
EDP04036
Predicted protein (203 aa)
     
        0.520
EDO98419
Predicted protein (401 aa)
     
        0.520
EDP03092
Predicted protein (236 aa)
     
        0.519
EDP02636
Predicted protein (377 aa)
     
        0.515
EDO99453
Predicted protein (240 aa)
     
        0.511
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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