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CDD1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CDD1" - Cytidine deaminase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDD1Cytidine deaminase (365 aa)    
Predicted Functional Partners:
EDP08757
Predicted protein (399 aa)
   
 
  0.987
EDP04387
Predicted protein (399 aa)
   
 
  0.987
EDP03125
Predicted protein (195 aa)
       
  0.953
EDP08197
Predicted protein (300 aa)
   
 
  0.943
EDP05844
Predicted protein (311 aa)
       
    0.903
NTD5
5’-nucleotidase (417 aa)
       
  0.902
FAP215
Flagellar associated protein (481 aa)
       
  0.902
EDO96757
Predicted protein (471 aa)
       
  0.902
EDO99727
Predicted protein (149 aa)
     
 
  0.833
APK1
Adenosine 5’-phosphosulfate kinase; Catalyzes the synthesis of activated sulfate (247 aa)
           
  0.741
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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