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EDP08992 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08992" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08992Predicted protein (202 aa)    
Predicted Functional Partners:
EDP06926
Predicted protein (796 aa)
   
   
  0.614
EDP04943
Ribosomal RNA adenine methylase transferase (203 aa)
   
   
  0.593
EDP05671
Predicted protein (693 aa)
   
        0.567
EDP09441
Dimethyladenosine transferase (352 aa)
   
   
  0.545
PUS2
tRNA pseudouridine synthase (239 aa)
   
 
  0.540
EDP05955
Hypothetical protein (425 aa)
   
   
  0.535
EDP00143
Predicted protein (446 aa)
   
 
  0.534
EDP03270
RimM-like protein (181 aa)
   
   
  0.533
MRPL19
Mitochondrial ribosomal protein L19 (312 aa)
         
  0.531
PRPL19
Plastid ribosomal protein L19 (153 aa)
         
  0.531
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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