STRINGSTRING
E2FR1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"E2FR1" - Transcription factor, E2F and DP-related in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E2FR1Transcription factor, E2F and DP-related (656 aa)    
Predicted Functional Partners:
CDKB1
Plant specific cyclin dependent kinase (324 aa)
           
  0.704
POLD1
DNA polymerase delta subunit one (1091 aa)
     
   
  0.588
CYCM1
Cyclin (473 aa)
           
  0.576
E2F1
E2F family transcription factor (437 aa)
           
  0.575
RDP2
Rhodanese domain phosphatase (135 aa)
           
  0.573
CYCC1
C-type cyclin (216 aa)
           
  0.573
CYCA1
A-type cyclin (421 aa)
           
  0.573
CDKC1
Cyclin dependent kinase (487 aa)
           
  0.573
CYCD1
D-type cyclin (421 aa)
           
  0.573
CYCU1
U-type cyclin (111 aa)
           
  0.573
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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