STRINGSTRING
EDP09016 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09016" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09016Predicted protein (791 aa)    
Predicted Functional Partners:
EDP06051
Predicted protein (571 aa)
     
        0.663
EDP07370
Predicted protein (1566 aa)
     
        0.660
EDP04794
Hypothetical protein (749 aa)
     
        0.659
EDP09200
Predicted protein (1008 aa)
     
        0.657
EDP09775
Predicted protein (1439 aa)
     
        0.655
STPK5
Serine/threonine protein kinase 5 (618 aa)
     
        0.655
EDP01646
Predicted protein (1093 aa)
     
        0.615
EDP06920
SNF2 superfamily protein (3251 aa)
     
        0.576
EDP05995
Predicted protein (292 aa)
     
        0.570
EDP01790
Predicted protein (441 aa)
     
        0.567
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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