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EDP09020 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09020" - Protein kinase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09020Protein kinase (816 aa)    
Predicted Functional Partners:
COPD1
Delta-cop (511 aa)
     
      0.719
EDP06665
Predicted protein (261 aa)
     
        0.502
EDO98460
EMB30/GNOM-like protein (1490 aa)
     
        0.497
EDP07592
Predicted protein (1416 aa)
     
        0.475
cnapl
Nucleosome assembly protein (350 aa)
       
      0.431
EDP00863
Nucleosome assembly protein (334 aa)
       
      0.431
EDP01090
Predicted protein (251 aa)
     
        0.427
ATPvD1
Vacuolar H+ ATPase V0 sector, subunit D (351 aa)
     
      0.425
EDP06823
Predicted protein (467 aa)
     
        0.423
EDP03316
Predicted protein (267 aa)
     
        0.423
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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