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EDP09028 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09028" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09028Predicted protein (359 aa)    
Predicted Functional Partners:
APC8
Subunit of anaphase promoting complex (573 aa)
     
        0.647
EDP02557
Predicted protein (856 aa)
     
        0.510
EDO99583
Predicted protein (1050 aa)
     
        0.509
EDP08806
Predicted protein (283 aa)
     
        0.507
EDP08807
Predicted protein (419 aa)
     
        0.502
EDP09858
Bromodomain protein (676 aa)
     
        0.500
APC1
Anaphase promoting complex subunit 1 (937 aa)
     
        0.500
EDP03613
Predicted protein (351 aa)
     
        0.496
EDP09957
Predicted protein (1517 aa)
     
        0.480
EDP01679
Predicted protein (1263 aa)
     
        0.480
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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