STRINGSTRING
EDP09040 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09040" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09040Predicted protein (1153 aa)    
Predicted Functional Partners:
EDP09957
Predicted protein (1517 aa)
     
        0.518
EDP03325
Predicted protein (728 aa)
     
        0.513
CSF1
Predicted protein of CSF family (720 aa)
     
        0.488
EDP01679
Predicted protein (1263 aa)
     
        0.480
E2F1
E2F family transcription factor (437 aa)
     
        0.477
EDP08713
Predicted protein (630 aa)
     
     
0.475
EDP00849
Predicted protein (796 aa)
     
        0.475
EDO96925
Predicted protein (347 aa)
     
        0.475
EDP03757
Predicted protein (1905 aa)
     
        0.447
EDP07999
Predicted protein (540 aa)
     
        0.425
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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