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EDP09050 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09050" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09050Predicted protein (548 aa)    
Predicted Functional Partners:
EDP07902
Predicted protein (1905 aa)
     
        0.658
EDO96522
Predicted protein (3102 aa)
     
        0.658
EDP05447
Predicted protein (685 aa)
     
        0.648
EDP03796
Predicted protein (321 aa)
     
        0.617
EDP02864
DNA-directed RNA polymerase III, subunit 2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1161 aa)
     
        0.563
EDO97749
Predicted protein (197 aa)
     
        0.560
MTR4
DEAD-box family ATP dependent helicase (945 aa)
     
        0.539
EDO99483
Predicted protein (221 aa)
     
        0.523
EDO97302
Histone methyltransferase (2487 aa)
     
        0.523
RET1
Predicted protein (1029 aa)
     
        0.521
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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