STRINGSTRING
EDP09121 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09121" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09121Predicted protein (1295 aa)    
Predicted Functional Partners:
EDP00473
Predicted protein (1583 aa)
     
        0.598
EDP06254
Predicted protein (2470 aa)
     
        0.524
EDO96522
Predicted protein (3102 aa)
     
        0.514
EDO98656
Predicted protein (1580 aa)
     
        0.513
EDP10001
Predicted protein (1997 aa)
     
        0.506
MAPKKK10
Mitogen activated protein kinase kinase kinase 10 (978 aa)
     
        0.506
MOT18
Predicted protein (500 aa)
     
        0.496
EDP07370
Predicted protein (1566 aa)
     
        0.480
EDP03300
Predicted protein (1515 aa)
     
        0.476
EDP01654
RNA-binding protein (704 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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