STRINGSTRING
EDP09123 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09123" - Transcription factor in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09123Transcription factor (495 aa)    
Predicted Functional Partners:
EDP00090
Predicted protein (456 aa)
     
 
  0.997
EDP05610
Predicted protein (661 aa)
     
      0.996
EDP02348
Predicted protein (341 aa)
     
 
  0.996
EDO97607
Predicted protein (193 aa)
     
 
  0.993
EDP02318
Predicted protein (1017 aa)
     
      0.992
NOP14
Nucleolar protein (1137 aa)
     
 
  0.990
EDP04019
Predicted protein (137 aa)
     
      0.989
EDP07957
Predicted protein (1139 aa)
     
      0.988
EDP05291
Predicted protein (319 aa)
     
 
  0.988
EDP03968
Predicted protein (319 aa)
     
      0.986
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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