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PRFB1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PRFB1" - Peptide chain release factor in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRFB1Peptide chain release factor (263 aa)    
Predicted Functional Partners:
rps18
Ribosomal protein S18 (137 aa)
   
  0.949
MRPL23
Mitochondrial ribosomal protein L23 (226 aa)
     
    0.939
EDP09135
Predicted protein (127 aa)
     
    0.930
PRPL13
Plastid ribosomal protein L13 (225 aa)
   
  0.925
RPL13a
Ribosomal protein L13a (185 aa)
   
  0.917
MRPL13
Mitochondrial ribosomal protein L13 (277 aa)
   
  0.917
MRPL2
Mitochondrial ribosomal protein L2 (266 aa)
   
  0.916
RPL8
Ribosomal protein L8 (259 aa)
   
  0.916
rpl2
Ribosomal protein L2 (278 aa)
   
  0.916
PRPL3
Plastid ribosomal protein L3 (259 aa)
   
  0.916
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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