STRINGSTRING
EDP09169 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09169" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09169Predicted protein (1905 aa)    
Predicted Functional Partners:
EDO98514
Predicted protein (2957 aa)
     
        0.656
EDO99825
Predicted protein (1374 aa)
     
        0.575
EDP00409
Predicted protein (862 aa)
     
        0.523
EDP01178
Predicted protein (2069 aa)
     
        0.522
EDP01133
Predicted protein (1252 aa)
     
        0.516
TML1
R-SNARE protein, tomsyn-like family (1204 aa)
     
        0.515
EDP02723
Predicted protein (2516 aa)
     
        0.514
EDO96076
Predicted protein (926 aa)
     
        0.513
EDP07858
Predicted protein (1182 aa)
     
        0.510
VPS41
Vacuolar assembly protein (910 aa)
     
        0.510
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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