STRINGSTRING
EDP09173 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09173" - Squamosa promoter binding protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09173Squamosa promoter binding protein (78 aa)    
Predicted Functional Partners:
EDP07524
Predicted protein (2361 aa)
     
        0.626
EDP10001
Predicted protein (1997 aa)
     
        0.619
EDP02154
Predicted protein (514 aa)
     
        0.595
MAPKKK10
Mitogen activated protein kinase kinase kinase 10 (978 aa)
     
        0.526
EDP09683
Predicted protein (3463 aa)
     
        0.519
EDO98363
Predicted protein (1092 aa)
     
        0.510
EDP07390
Predicted protein (611 aa)
     
        0.508
EDO96484
Predicted protein (889 aa)
     
        0.508
CYG6
Guanylate cyclase (2281 aa)
     
        0.505
EDP08124
Predicted protein (1442 aa)
     
        0.482
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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