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STRINGSTRING
EDP09173 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09173" - Squamosa promoter binding protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09173Squamosa promoter binding protein (78 aa)    
Predicted Functional Partners:
EDP07524
Predicted protein (2361 aa)
     
        0.516
EDP10001
Predicted protein (1997 aa)
     
        0.508
EDP02154
Predicted protein (514 aa)
     
        0.480
MAPKKK10
Mitogen activated protein kinase kinase kinase 10 (978 aa)
     
        0.408
EDP09683
Predicted protein (3463 aa)
     
        0.407
EDP07390
Predicted protein (611 aa)
     
        0.405
EDO98363
Predicted protein (1092 aa)
     
        0.405
EDO96484
Predicted protein (889 aa)
     
        0.405
CYG6
Guanylate cyclase ; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family (2281 aa)
     
        0.403
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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