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EDP09190 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09190" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09190Predicted protein (397 aa)    
Predicted Functional Partners:
DRG1m
GTP binding protein (355 aa)
     
 
  0.981
EDO98303
GTP-binding protein (405 aa)
     
 
  0.916
EDO96769
Predicted protein (213 aa)
     
      0.686
EIF5Ba
Eukaryotic initiation factor (1651 aa)
     
      0.686
EDO97905
Predicted protein (634 aa)
     
      0.651
EDO98755
Predicted protein (1302 aa)
     
      0.639
EDP06084
WD40 repeat protein (382 aa)
       
      0.626
EDP04828
Predicted protein (526 aa)
       
      0.626
MAP2
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (510 aa)
     
      0.564
EDP03955
Predicted protein (451 aa)
       
      0.549
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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