STRINGSTRING
CPL11 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CPL11" - Translation factor in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPL11Translation factor (278 aa)    
Predicted Functional Partners:
EDP08434
poly(A) binding protein (136 aa)
     
   
  0.717
RB47
Polyadenylate-binding protein RB47; Binds the poly(A) tail of mRNA (636 aa)
           
  0.710
EDP05600
DNA topoisomerase-like protein; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (772 aa)
         
  0.696
EDP08757
Predicted protein (399 aa)
   
   
  0.688
EDP04387
Predicted protein (399 aa)
   
   
  0.688
EDO99060
Predicted protein (334 aa)
   
 
  0.637
RB60
Protein disulfide isomerase 1 (532 aa)
           
  0.601
EDP06926
Predicted protein (796 aa)
   
   
  0.598
FAP131
Flagellar associated protein (432 aa)
           
  0.575
RB38
Chloroplast-targeted RNA-binding protein (382 aa)
           
  0.571
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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