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EDP09240 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09240" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09240Predicted protein (639 aa)    
Predicted Functional Partners:
SPO11A
Topoisomerase; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity (414 aa)
 
 
  0.973
SPO11B
Topoisomerase (1873 aa)
   
 
  0.949
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
   
   
  0.695
CPLD31
Predicted protein (246 aa)
   
          0.490
SEC24C
COP-II coat subunit (825 aa)
     
        0.480
EDP08677
Predicted protein (1660 aa)
     
        0.479
EDP03570
Predicted protein (494 aa)
     
        0.477
EDP07456
Predicted protein (308 aa)
     
   
  0.475
EDP03842
Predicted protein (982 aa)
     
        0.475
EDP03422
Predicted protein (1197 aa)
     
        0.465
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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