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CPLD46 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CPLD46" - DEAD/DEAH-box helicase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPLD46DEAD/DEAH-box helicase (485 aa)    
Predicted Functional Partners:
EDP01505
Predicted protein (299 aa)
     
  0.913
EDO97979
Predicted protein (626 aa)
     
 
  0.834
EDP06043
Predicted protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1167 aa)
     
    0.821
EDP02918
Nucleolar protein (1380 aa)
     
 
    0.794
RNPH1
3’-5’ exoribonuclease PH component of the exosome (245 aa)
     
  0.786
RRP46
Exosome complex exonuclease (242 aa)
     
  0.780
EDP05821
Predicted protein (924 aa)
     
    0.779
RNPH3
3’-5’ exoribonuclease PH component of the exosome (296 aa)
     
  0.762
EDO96359
Predicted protein (92 aa)
     
  0.741
EDP05793
Predicted protein (302 aa)
     
  0.740
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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