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STRINGSTRING
VPS34 protein (Chlamydomonas reinhardtii) - STRING interaction network
VPS34-like PI-3-kinase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS34VPS34-like PI-3-kinase ; Belongs to the PI3/PI4-kinase family (1098 aa)    
Predicted Functional Partners:
APG6
Autophagy protein (495 aa)
     
 
  0.986
RABF1
Small rab-related GTPase (202 aa)
     
  0.981
TEF21
Phosphoinositide phosphatase (470 aa)
     
  0.979
PTN1
PTEN PI-3 phosphatase (647 aa)
     
  0.978
APG8
Autophagy protein ; Belongs to the ATG8 family (134 aa)
       
 
  0.971
EDP05127
Smilar to phosphatidylinositol 3-or 4-kinase ; Belongs to the PI3/PI4-kinase family (1431 aa)
     
 
0.956
MOT27
Predicted protein (573 aa)
     
 
  0.947
PIK1
Phosphatidylinositol 4-kinase ; Belongs to the PI3/PI4-kinase family (589 aa)
     
 
0.942
EDP00601
FAB-like protein, FYVE-domain PI-3,4-kinase (1269 aa)
     
 
  0.939
VPS11
Subunit of VPS-C complex (1102 aa)
     
 
  0.936
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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