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VPS34 protein (Chlamydomonas reinhardtii) - STRING interaction network
VPS34-like PI-3-kinase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS34VPS34-like PI-3-kinase (1098 aa)    
Predicted Functional Partners:
APG6
Autophagy protein (495 aa)
     
  0.994
EDP05135
SNF2 superfamily protein (1610 aa)
     
  0.966
EDP05127
Smilar to phosphatidylinositol 3-or 4-kinase (1431 aa)
     
0.953
EDO97620
TOR binding partner raptor (289 aa)
     
  0.930
PIK1
Phosphatidylinositol 4-kinase (589 aa)
     
 
0.924
PTN1
PTEN PI-3 phosphatase (647 aa)
     
 
    0.923
EDP08479
Phospholipase C (495 aa)
       
  0.911
PIS1
Phosphatidylinositol synthase (247 aa)
     
 
  0.907
RABF1
Small rab-related GTPase (202 aa)
     
  0.905
LST8
TOR kinase binding protein (315 aa)
     
  0.892
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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