STRINGSTRING
EDP09371 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09371" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09371Predicted protein (465 aa)    
Predicted Functional Partners:
MCM8
Minichromosome maintenance protein 8 (590 aa)
     
        0.524
EDO98689
Predicted protein (747 aa)
     
        0.505
EDP04516
SWI/SNF chromatin remodeling complex component (845 aa)
     
        0.504
EDP08895
Predicted protein (277 aa)
     
        0.492
EDP00060
Hypothetical protein (260 aa)
     
        0.480
EDP06099
ATP-dependent DNA helicase (330 aa)
     
        0.477
EDP09871
Predicted protein (1378 aa)
     
        0.475
EDP09789
Predicted protein (647 aa)
     
        0.475
EDP04535
Predicted protein (214 aa)
     
        0.429
RAD51
DNA recombination protein (343 aa)
     
        0.429
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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